Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862499.1_cds_XP_016515366.1_27720
CDS Infomation

[gene=LOC107832071] [db_xref=GeneID:107832071] [protein=heparanase-like protein 2 isoform X2] [protein_id=XP_016515366.1] [location=complement(join(70109..70498,71799..71898,72018..72143,72233..72422,75933..76166,76269..76417,77337..77520,77741..77777,77902..78111))] [gbkey=CDS]
Sequence

ATGGGCTTCCCACCCTTCTTGTTAATCTTTCTGGCGCTGTGTCCTGCATTTTTGGCACAA
ATAGTTGAAGATACAGCACTTGTGATTGATGGAACTGTAAAAATTGCTGAGACAGATGCT
AATTATGTATGCGCTACCCTCGATTGGTGGCCTAAAGAAAAATGTAACTACAACGAATGC
CCTTGGGGCTACACATCTCTGATGAATCTGGATTTGTCTCACCCCTTTCTGGCAAATTCT
ATTAAAGCTTTCAACCCTTTGAGATTACGACTTGGAGGTTCTCTGCAAAACCGAGTAATA
TATGACGTAGGCAATTTGGAGTCTCGTTGCCATCCGTTTACCAAGCAGGGGGATGGGTTG
TTTGGATTTTCAAAGGGATGCTTACATATGAATAGATGGGATGAGCTAAATAGCTTTTTC
AAGAAGACGGGAGCACTTGTGACCTTTGGCCTGAATGCCTTGCATGGGAGGCAGCGGACG
GGTAAGCGTTTGTGGGGAGGGAATTGGGATTCCAGCAACGCCCATGATTTCATAAATTAC
ACTATTTCCAGGGGCTACCAGATACACTCATGGGAATTTGGAAATGAGTTGAGTGGTAAG
GGGATTGGTGCAAATGTTAATGCCGAGCAATACGGAACAGATGTTATCCATCTTAACAAT
CTCATAGACCAACTGTATAAGCATTTCCAACCCCGACCACTTCTCTTAGCACCAGGAGGA
TTCTACGATAAAGAGTGGTATGAGAAGCTCCTTGAGGTGTCAGGGCCAGGCACTGTCGAT
GCCTTGACTCATCATATATATAATCTTGGTCCAGGATCTGACCGCAATCTCGTCAACAAA
ATTTTAAATCCCCTGCACTTAAATAAAATTGCCGACACATTCAGTAATCTTACCCAAACC
ATTGCAATGAATGGTCCTTGGACGTCAGCTTGGGTTGGAGAATCTGGTGGGGCCTTCAAC
AATGGAGGTCATAACGTGTCTAACACATTTGTGAACAGTTTTTGGTACTTGGATCAGCTT
GGGATGGCAGCCAAGTACCACACTAAAGTATATTGCAGGCAGACTTTTGTTGGTGGAAAT
TATGGGCTCCTTGACACAAGCACATTTATCCCAAATCCTGATTATTACAGTGCACTTCTT
TGGCATCGGCTGATGGGAAAAGGAGTTCTTGCTGTTAGCAGAAATTCATCATCATATCTG
CGCTCTTATGCCCACTGTACAAGAGATAGAGCTGGTGTGACATTACTTTTGATCAATTTA
AGCAACCAAACTCAGTATGGAGTCAGCATCGAATCTAGTGCAACCACCACCTCGCATGCC
AACGAGAAATCAAATCACAAGAAGTCGTTTATACATGGTCTTAAGAAAACTTTTTCATGG
GTTGGAAGTAAATCATCAGACGTTACATTATCACGAGAAGAGTATCATCTGACTCCACTA
GATGGGAACCTTCACAATAAAATTATGCTCCTGAATGGATTACCATTACAGCTCACAGAA
GATGGAGACATCCCAAGTTTGTCTCCAGTCATTGTAAACATAAAGTCCCCAATATCAGTT
GCCCCCTTGTCCATCAAATTCTTAGTATTCCCCAACTATAATTCTCCAGGTTGTAGATAG

Peptide Sequence

PEP ID

XP_016515366.1
PEP Infomation

PREDICTED: heparanase-like protein 2 isoform X2 [Nicotiana tabacum]
Sequence

MGFPPFLLIFLALCPAFLAQIVEDTALVIDGTVKIAETDANYVCATLDWWPKEKCNYNEC
PWGYTSLMNLDLSHPFLANSIKAFNPLRLRLGGSLQNRVIYDVGNLESRCHPFTKQGDGL
FGFSKGCLHMNRWDELNSFFKKTGALVTFGLNALHGRQRTGKRLWGGNWDSSNAHDFINY
TISRGYQIHSWEFGNELSGKGIGANVNAEQYGTDVIHLNNLIDQLYKHFQPRPLLLAPGG
FYDKEWYEKLLEVSGPGTVDALTHHIYNLGPGSDRNLVNKILNPLHLNKIADTFSNLTQT
IAMNGPWTSAWVGESGGAFNNGGHNVSNTFVNSFWYLDQLGMAAKYHTKVYCRQTFVGGN
YGLLDTSTFIPNPDYYSALLWHRLMGKGVLAVSRNSSSYLRSYAHCTRDRAGVTLLLINL
SNQTQYGVSIESSATTTSHANEKSNHKKSFIHGLKKTFSWVGSKSSDVTLSREEYHLTPL
DGNLHNKIMLLNGLPLQLTEDGDIPSLSPVIVNIKSPISVAPLSIKFLVFPNYNSPGCR

Transcript Sequence

Gene sequence data has not been registered.